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Description : carotenoid isomerase *(DWARF27) & original description: none
Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g19690 | |
| Cluster | HCCA: Cluster_271 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00018p00255680 | evm_27.TU.AmTr_v1... | Beta-carotene isomerase D27, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| AT1G64680 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g033681 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g02991 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aev_g49501 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g06641 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Ala_g11103 | No alias | not classified & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Aob_g06285 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31538 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene11607.t1 | Aspi01Gene11607 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008838 | No alias | carotenoid isomerase *(DWARF27) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G115700.1 | Ceric.02G115700 | carotenoid isomerase *(DWARF27) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G025400.1 | Ceric.09G025400 | not classified & original description: pacid=50588408... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13831 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02296 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g12391 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g31522 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g03239 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04481 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01019663001 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_18729 | No alias | carotenoid isomerase (DWARF27) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os08g02210.2 | LOC_Os08g02210 | Beta-carotene isomerase D27, chloroplastic... | 0.11 | OrthoFinder output from all 47 species | |
| Len_g25833 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g11491 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g13325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_167711g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11577 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Nbi_g26733 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Nbi_g30675 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19910 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Pir_g09207 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Pnu_g26521 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g62487 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017141 | No alias | carotenoid isomerase *(DWARF27) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g06073 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo173467 | No alias | Phytohormones.strigolactone.synthesis.DWARF27... | 0.04 | OrthoFinder output from all 47 species | |
| Smo99956 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g008630.4.1 | Solyc08g008630 | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g05404 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g19072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g28773 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e029191_P001 | Zm00001e029191 | Beta-carotene isomerase D27, chloroplastic... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
| BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006865 | amino acid transport | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025114 | D27-like_C | 149 | 231 |
| No external refs found! |