Aliases : VCL1, EMB258, MAN
Description : component *(VPS16/VCL1) of HOPS/CORVET membrane tethering complexes & original description: none
Gene families : OG0004533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004533_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g08601 | |
Cluster | HCCA: Cluster_314 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00030p00200210 | VCL1, EMB258,... | Vesicle trafficking.target membrane... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01127 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07384 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01020844001 | VCL1, EMB258, MAN | Vesicle trafficking.target membrane... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10179 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03195 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0043.g012879 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Smo80688 | VCL1, EMB258, MAN | Vesicle trafficking.target membrane... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
CC | GO:0016272 | prefoldin complex | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |