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  5. Aop_g01641

Aop_g01641 (PTAC4, VIPP1)


Aliases : PTAC4, VIPP1

Description : protein involved in plastid membrane fusion *(VIPP) & original description: none


Gene families : OG0002497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01641
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00198600 PTAC4, VIPP1,... Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
AT1G65260 PTAC4, VIPP1 plastid transcriptionally active 4 0.05 OrthoFinder output from all 47 species
Adi_g016621 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Adi_g019901 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.09 OrthoFinder output from all 47 species
Aev_g12997 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.07 OrthoFinder output from all 47 species
Als_g21262 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Aob_g05137 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43442.t1 PTAC4, VIPP1,... protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035535 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Cba_g03141 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.02 OrthoFinder output from all 47 species
Cba_g09434 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.06 OrthoFinder output from all 47 species
Ceric.21G054600.1 PTAC4, VIPP1,... protein involved in plastid membrane fusion *(VIPP) &... 0.13 OrthoFinder output from all 47 species
Ceric.25G000800.1 PTAC4, VIPP1,... protein involved in plastid membrane fusion *(VIPP) &... 0.1 OrthoFinder output from all 47 species
Dac_g07394 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Dcu_g03592 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Dcu_g15380 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Dde_g03283 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Dde_g07895 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.06 OrthoFinder output from all 47 species
Ehy_g07429 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01019065001 PTAC4, VIPP1 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Gb_32562 PTAC4, VIPP1 VIPP protein involved in plastid membrane fusion 0.04 OrthoFinder output from all 47 species
LOC_Os01g67000.1 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.02 OrthoFinder output from all 47 species
Lfl_g01479 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Lfl_g38402 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Mp5g20680.1 PTAC4, VIPP1 VIPP protein involved in plastid membrane fusion 0.03 OrthoFinder output from all 47 species
Msp_g20762 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Nbi_g07063 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Ore_g16052 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Pir_g02210 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.07 OrthoFinder output from all 47 species
Pir_g13472 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Ppi_g10062 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.08 OrthoFinder output from all 47 species
Sam_g07518 No alias protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Smo93752 PTAC4, VIPP1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc11g008990.2.1 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.06 OrthoFinder output from all 47 species
Spa_g11958 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.09 OrthoFinder output from all 47 species
Spa_g54328 PTAC4, VIPP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13395 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.07 OrthoFinder output from all 47 species
Zm00001e018980_P001 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.06 OrthoFinder output from all 47 species
Zm00001e028569_P001 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007157 PspA_IM30 90 304
No external refs found!