1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g01540

Aop_g01540


Description : not classified & original description: none


Gene families : OG0001843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01540

Target Alias Description ECC score Gene Family Method Actions
Adi_g010784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000991 No alias not classified & original description: CDS=384-923 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010308 No alias not classified & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Cba_g05124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G060800.1 Ceric.24G060800 not classified & original description: pacid=50629393... 0.04 OrthoFinder output from all 47 species
Dac_g02572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013292 No alias not classified & original description: CDS=107-649 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013395 No alias not classified & original description: CDS=85-822 0.03 OrthoFinder output from all 47 species
Sam_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!