Lfl_g03404 (EMB2369)


Aliases : EMB2369

Description : leucine-tRNA ligase & original description: none


Gene families : OG0005525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005525_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03404

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00043170 EMB2369,... Leucine--tRNA ligase, chloroplastic/mitochondrial... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00046740 EMB2369,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 OrthoFinder output from all 47 species
Adi_g109524 EMB2369 leucine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11026 EMB2369 leucine-tRNA ligase & original description: none 0.07 OrthoFinder output from all 47 species
Als_g17065 EMB2369 leucine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03591 EMB2369 leucine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12623 EMB2369 leucine-tRNA ligase & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g13379 EMB2369 leucine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G067300.1 EMB2369, Ceric.03G067300 leucine-tRNA ligase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000865.51 EMB2369 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre13.g578451 EMB2369 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 OrthoFinder output from all 47 species
Dcu_g03124 EMB2369 leucine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07073 EMB2369 leucine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01662 EMB2369 leucine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012668001 EMB2369 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Gb_36904 EMB2369 leucine-tRNA ligase 0.05 OrthoFinder output from all 47 species
LOC_Os01g03020.1 EMB2369, LOC_Os01g03020 leucine-tRNA ligase 0.02 OrthoFinder output from all 47 species
MA_413765g0010 EMB2369 leucine-tRNA ligase 0.04 OrthoFinder output from all 47 species
MA_9972763g0010 EMB2369 Leucine--tRNA ligase, chloroplastic/mitochondrial... 0.03 OrthoFinder output from all 47 species
Mp3g22600.1 EMB2369 leucine-tRNA ligase 0.09 OrthoFinder output from all 47 species
Nbi_g15838 EMB2369 leucine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g15404 EMB2369 leucine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26221 EMB2369 leucine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48734 EMB2369 leucine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16597 No alias leucine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g080990.2.1 EMB2369, Solyc02g080990 leucine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Spa_g15501 EMB2369 leucine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025691_P001 EMB2369, Zm00001e025691 leucine-tRNA ligase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 151 283
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 842 954
IPR025709 Leu_tRNA-synth_edit 332 515
IPR002300 aa-tRNA-synth_Ia 752 787
No external refs found!