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Aliases : HCF136
Description : protein involved in PS-II assembly *(HCF136) & original description: none
Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g31805 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00083110 | HCF136,... | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G23120 | HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | 0.16 | OrthoFinder output from all 47 species | |
| Adi_g023753 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g35613 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Als_g23347 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Aob_g06472 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09964 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72238.t1 | HCF136, Aspi01Gene72238 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19514 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.10G037400.1 | HCF136, Ceric.10G037400 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Cre06.g273700 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14607 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g01147 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00586 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g20509 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01012045001 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_03750 | HCF136 | HCF136 protein involved in PS-II assembly | 0.11 | OrthoFinder output from all 47 species | |
| Len_g11400 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g02953 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10433328g0010 | HCF136 | HCF136 protein involved in PS-II assembly | 0.1 | OrthoFinder output from all 47 species | |
| Mp4g23900.1 | HCF136 | HCF136 protein involved in PS-II assembly | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g03512 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14696 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.16 | OrthoFinder output from all 47 species | |
| Ore_g40589 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g10204 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Pnu_g05859 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g00841 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009047 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g07654 | No alias | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Smo227615 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g014150.4.1 | HCF136, Solyc02g014150 | HCF136 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g12995 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11749 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e030125_P002 | HCF136, Zm00001e030125 | HCF136 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028203 | PSII_CF48-like_dom | 135 | 454 |
| No external refs found! |