Ala_g26842 (SECA1, AtcpSecA, AGY1)

Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none

Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g26842

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00116920	SECA1, AtcpSecA,...	Protein translocation.chloroplast.thylakoid membrane...	0.11	OrthoFinder output from all 47 species
AT4G01800	SECA1, AtcpSecA, AGY1	Albino or Glassy Yellow 1	0.04	OrthoFinder output from all 47 species
Adi_g007063	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Aev_g01548	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Aob_g02321	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.06	OrthoFinder output from all 47 species
Aop_g13757	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Aop_g60479	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Aspi01Gene56831.t1	SECA2, Aspi01Gene56831	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016205	SECA2	component *(SecA2) of inner envelope Sec2 post-import...	0.03	OrthoFinder output from all 47 species
Azfi_s0155.g053632	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Cba_g17139	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Ceric.02G067600.1	SECA1, AtcpSecA,...	component *(SecA1) of thylakoid membrane Sec1...	0.09	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000219.51	SECA1, AtcpSecA, AGY1	Protein translocase subunit SecA, chloroplastic...	0.03	OrthoFinder output from all 47 species
Cre12.g517900	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.05	OrthoFinder output from all 47 species
Dac_g06495	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Dac_g06496	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Dcu_g05773	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Ehy_g07099	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
GSVIVT01028249001	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.05	OrthoFinder output from all 47 species
Gb_00858	SECA1, AtcpSecA, AGY1	Protein translocase subunit SecA, chloroplastic...	0.03	OrthoFinder output from all 47 species
Gb_34931	SECA1, AtcpSecA, AGY1	component SecA1 of thylakoid membrane Sec1 translocation system	0.04	OrthoFinder output from all 47 species
LOC_Os01g21820.1	SECA1, AtcpSecA,...	component SecA2 of inner envelope Sec2 post-import...	0.04	OrthoFinder output from all 47 species
Len_g29022	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Len_g36322	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Lfl_g02357	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.1	OrthoFinder output from all 47 species
Mp5g09750.1	SECA1, AtcpSecA, AGY1	component SecA1 of thylakoid membrane Sec1 translocation system	0.06	OrthoFinder output from all 47 species
Msp_g23935	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Msp_g23936	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Nbi_g15165	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Nbi_g30518	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Ore_g18515	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Pir_g06026	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Pnu_g31499	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Ppi_g05317	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.06	OrthoFinder output from all 47 species
Ppi_g14444	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016761	SECA1, AtcpSecA, AGY1	channel-forming component *(Tim23) of inner...	0.04	OrthoFinder output from all 47 species
Sam_g28166	No alias	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Smo156007	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.05	OrthoFinder output from all 47 species
Smo176627	SECA2	Protein translocation.chloroplast.inner envelope Sec2...	0.02	OrthoFinder output from all 47 species
Solyc01g080840.3.1	SECA1, AtcpSecA,...	component SecA1 of thylakoid membrane Sec1 translocation system	0.04	OrthoFinder output from all 47 species
Spa_g10168	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Spa_g17299	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Tin_g11796	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Zm00001e008967_P001	SECA2, Zm00001e008967	component SecA2 of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Zm00001e017535_P001	SECA1, AtcpSecA,...	component SecA1 of thylakoid membrane Sec1 translocation system	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0017038	protein import	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011130	SecA_preprotein_X-link_dom	299	405
IPR011116	SecA_Wing/Scaffold	755	966
IPR011115	SecA_DEAD	81	449

External Links

No external refs found!

Ala_g26842 (SECA1, AtcpSecA, AGY1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation