1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g23339

Ala_g23339 (PTAC17)


Aliases : PTAC17

Description : cofactor of plastid-encoded RNA polymerase *(TAC17) & original description: none


Gene families : OG0001348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001348_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g23339
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00183310 PTAC17,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
AT1G15730 No alias Cobalamin biosynthesis CobW-like protein 0.02 OrthoFinder output from all 47 species
Aob_g01393 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.03 OrthoFinder output from all 47 species
Cre16.g692901 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.01 OrthoFinder output from all 47 species
Dde_g11205 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.11 OrthoFinder output from all 47 species
Ehy_g22577 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01017471001 PTAC17 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Gb_13256 PTAC17 TAC17 cofactor of plastid-encoded RNA polymerase 0.07 OrthoFinder output from all 47 species
LOC_Os02g55630.1 PTAC17, LOC_Os02g55630 TAC17 cofactor of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species
Mp1g05690.1 No alias TAC17 cofactor of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species
Nbi_g17819 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.01 OrthoFinder output from all 47 species
Pp3c11_23140V3.1 PTAC17, Pp3c11_23140 plastid transcriptionally active 17 0.01 OrthoFinder output from all 47 species
Ppi_g13366 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014804 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0495.g027428 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.09 OrthoFinder output from all 47 species
Smo405512 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Spa_g56718 PTAC17 cofactor of plastid-encoded RNA polymerase *(TAC17) &... 0.04 OrthoFinder output from all 47 species
Zm00001e016143_P001 Zm00001e016143 TAC17 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011629 CobW-like_C 369 462
IPR003495 CobW/HypB/UreG_dom 100 285
No external refs found!