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  5. Ala_g12304

Ala_g12304


Description : not classified & original description: none


Gene families : OG0003745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12304
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00156850 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g014242 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g12000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0442.g070355 No alias not classified & original description: CDS=6-3200 0.06 OrthoFinder output from all 47 species
Cba_g17582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G026400.1 Ceric.31G026400 not classified & original description: pacid=50575060... 0.04 OrthoFinder output from all 47 species
Dcu_g11463 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029432001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_09005 No alias no description available(sp|d5lxj0|cip73_lotja : 275.0) 0.02 OrthoFinder output from all 47 species
Gb_30758 No alias no description available(sp|d5lxj0|cip73_lotja : 374.0) 0.03 OrthoFinder output from all 47 species
MA_10437085g0010 No alias no description available(sp|d5lxj0|cip73_lotja : 126.0) 0.02 OrthoFinder output from all 47 species
Mp7g19730.1 No alias no description available(sp|d5lxj0|cip73_lotja : 174.0) 0.03 OrthoFinder output from all 47 species
Msp_g15179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022892 No alias not classified & original description: CDS=266-3205 0.03 OrthoFinder output from all 47 species
Smo403529 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g082160.4.1 Solyc04g082160 no description available(sp|d5lxj0|cip73_lotja : 145.0) 0.02 OrthoFinder output from all 47 species
Spa_g38086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006652_P005 Zm00001e006652 no description available(sp|d5lxj0|cip73_lotja : 224.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 25 95
No external refs found!