Description : nucleocytoplasmic import karyopherin *(IMB1) & original description: none
Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g09011 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00188470 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
AT5G53480 | No alias | ARM repeat superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
Aob_g16372 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13735 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g17045 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.33G016000.1 | Ceric.33G016000 | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021348.90 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
Cre01.g034000 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038575001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g38110.1 | LOC_Os12g38110 | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species | |
Len_g02910 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g34606 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.1 | OrthoFinder output from all 47 species | |
MA_12771g0010 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species | |
MA_871185g0010 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species | |
Mp6g11310.1 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.06 | OrthoFinder output from all 47 species | |
Ore_g18337 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g30274 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c11_26710V3.1 | Pp3c11_26710 | ARM repeat superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Smo124593 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
Smo185511 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g082940.3.1 | Solyc03g082940 | IMB1 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g052030.3.1 | Solyc06g052030 | IMB1 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
Spa_g12818 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g04168 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06671 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002934_P001 | Zm00001e002934 | IMB1 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e018172_P001 | Zm00001e018172 | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031516_P001 | Zm00001e031516 | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
MF | GO:0031267 | small GTPase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0001181 | RNA polymerase I general transcription initiation factor activity | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
MF | GO:0005254 | chloride channel activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006361 | transcription initiation at RNA polymerase I promoter | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
BP | GO:0006821 | chloride transport | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030955 | potassium ion binding | IEP | HCCA |
MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140223 | general transcription initiation factor activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001494 | Importin-beta_N | 23 | 102 |
No external refs found! |