Aliases : ATCUL4, CUL4
Description : scaffold component *(CUL4) of CUL4-DDB1 ubiquitination complexes & original description: none
Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g02559 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g009657 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06641 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G009200.1 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000157.110 | ATCUL4, CUL4 | Cullin-4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020934.33 | CUL3B, ATCUL3B | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Len_g08803 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436569g0010 | ATCUL3A, ATCUL3,... | Cullin-3A OS=Arabidopsis thaliana (sp|q9zvh4|cul3a_arath : 422.0) | 0.02 | OrthoFinder output from all 47 species | |
MA_36374g0010 | ATCUL4, CUL4 | Cullin-4 OS=Arabidopsis thaliana (sp|q8lgh4|cul4_arath : 352.0) | 0.02 | OrthoFinder output from all 47 species | |
MA_507769g0010 | ATCUL3A, ATCUL3,... | Cullin-3A OS=Arabidopsis thaliana (sp|q9zvh4|cul3a_arath : 299.0) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g07340.1 | ATCUL4, CUL4 | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g12190.1 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25878 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g05907 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Smo172620 | ATCUL4, CUL4 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g010820.3.1 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g021470.4.1 | ATCUL4, CUL4,... | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g01191 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquiTination... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005919_P001 | ATCUL4, CUL4,... | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e011908_P001 | ATCUL4, CUL4,... | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015820_P001 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021679_P001 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
MF | GO:0031625 | ubiquitin protein ligase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
CC | GO:0030014 | CCR4-NOT complex | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |