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  5. Msp_g07676

Msp_g07676


Description : beta-type-5 component *(PBE) of 26S proteasome & original description: none


Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07676

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00083100 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
AT1G13060 PBE1 20S proteasome beta subunit E1 0.05 OrthoFinder output from all 47 species
Adi_g022653 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Adi_g080574 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g09083 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ala_g01174 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Als_g01614 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aop_g00419 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Azfi_s0001.g000499 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cba_g00543 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.28G031800.1 Ceric.28G031800 beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Dcu_g03476 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
GSVIVT01010375001 No alias Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Gb_01835 No alias component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os06g06030.1 LOC_Os06g06030 component beta type-5 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Lfl_g12238 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
MA_2177g0010 PBE1 component beta type-5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp2g06230.1 No alias component beta type-5 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Nbi_g43610 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Pir_g00866 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Smo270977 No alias Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Solyc05g056160.3.1 Solyc05g056160 component beta type-5 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Spa_g02376 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Spa_g05432 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Tin_g02565 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e036472_P001 Zm00001e036472 component beta type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 59 239
No external refs found!