Aliases : 54CP, SRP54CP, CPSRP54, FFC
Description : component *(cpSRP54) of thylakoid membrane SRP insertion system & original description: none
Gene families : OG0005930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005930_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00031p00204460 | 54CP, SRP54CP,... | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g05995 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g31519 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.03G060800.1 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g21514 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g10157 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g19073 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
Gb_10951 | 54CP, SRP54CP,... | component cpSRP54 of thylakoid membrane SRP insertion system | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g05556.1 | 54CP, SRP54CP,... | component cpSRP54 of thylakoid membrane SRP insertion system | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04096 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g31976 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0079.g017848 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0444.g027392 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19770 | No alias | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29558 | No alias | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g12383 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | Interproscan |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004832 | valine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006382 | adenosine to inosine editing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009975 | cyclase activity | IEP | HCCA |
MF | GO:0009976 | tocopherol cyclase activity | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |