Pir_g16309 (WRKY28, ATWRKY28)

Aliases : WRKY28, ATWRKY28

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g16309

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.03	OrthoFinder output from all 47 species
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.02	OrthoFinder output from all 47 species
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.02	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.03	OrthoFinder output from all 47 species
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	OrthoFinder output from all 47 species
Adi_g021792	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g031754	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g041253	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058461	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074010	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g109927	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g117328	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g117329	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g30728	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46837	WRKY3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g13886	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g29621	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g39081	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06722.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27651.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene52813.t1	Aspi01Gene52813	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g010967	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.03	OrthoFinder output from all 47 species
Cba_g19033	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68595	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G101400.1	WRKY4, Ceric.01G101400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.03G038600.1	WRKY33,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G001000.1	ATWRKY24,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.29G026500.1	Ceric.29G026500	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g33224	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11035	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08194	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g18481	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011356001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
LOC_Os07g48260.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os08g29660.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g41417	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g29171	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_268327g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_53351g0010	WRKY2, ATWRKY2	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g06256	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g17523	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g05077	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1497	0.04	OrthoFinder output from all 47 species
Sam_g22478	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26717	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g28344	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc07g066220.3.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g03864	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g12510	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g19666	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g30098	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g13035	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005219_P001	WRKY1, ZAP1,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e005732_P002	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e011098_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025096_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e025935_P001	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	419	475

External Links

No external refs found!

Pir_g16309 (WRKY28, ATWRKY28)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation