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  5. Pir_g00854

Pir_g00854 (VPS26B)


Aliases : VPS26B

Description : component *(VPS26) of Retromer protein recycling complex & original description: none


Gene families : OG0003204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00854

Target Alias Description ECC score Gene Family Method Actions
Als_g03641 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.07 OrthoFinder output from all 47 species
Aop_g02794 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Cba_g03125 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020589.5 VPS26B Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g02603 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
LOC_Os11g41130.2 VPS26B, LOC_Os11g41130 component VPS26 of Retromer protein recycling complex 0.03 OrthoFinder output from all 47 species
Msp_g03458 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Nbi_g06585 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.04 OrthoFinder output from all 47 species
Spa_g00931 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Spa_g09782 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR028934 Vps26-related 8 283
No external refs found!