1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g22112

Len_g22112


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00158590 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Adi_g061008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012038001 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
GSVIVT01019442001 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g51400.1 LOC_Os02g51400 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g12160.1 LOC_Os06g12160 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
MA_199195g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
MA_41988g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Mp3g10920.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g04513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002972 No alias not classified & original description: CDS=1-3879 0.04 OrthoFinder output from all 47 species
Solyc06g071980.3.1 Solyc06g071980 ATPase family AAA domain-containing protein FIGL1... 0.01 OrthoFinder output from all 47 species
Zm00001e016412_P002 Zm00001e016412 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 876 1006
IPR041569 AAA_lid_3 1031 1064
No external refs found!