Nbi_g13780


Description : not classified & original description: none


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13780
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00027180 evm_27.TU.AmTr_v1... Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G42750 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g026027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aop_g29266 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g31435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G070000.1 Ceric.18G070000 not classified & original description: pacid=50621590... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000525.2 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.09 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g25975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os01g53020.1 LOC_Os01g53020 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g45350.1 LOC_Os05g45350 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g33055 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pnu_g07196 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g15415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g30819 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09722 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g20619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028229_P001 Zm00001e028229 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 132 194
No external refs found!