Nbi_g11552

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g11552
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00017p00136990	FBA2,...	Cellular respiration.glycolysis.plastidial...	0.07	OrthoFinder output from all 47 species
AMTR_s00040p00201950	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.sucrose...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00163810	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.sucrose...	0.04	OrthoFinder output from all 47 species
AT2G21330	FBA1	fructose-bisphosphate aldolase 1	0.08	OrthoFinder output from all 47 species
AT4G38970	FBA2	fructose-bisphosphate aldolase 2	0.11	OrthoFinder output from all 47 species
Adi_g055177	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g079492	FBA2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g079493	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g079494	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g05991	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Aev_g11908	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g03505	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g05006	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Als_g18202	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
Als_g28670	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28929	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g57032	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g61935	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g05694	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g06476	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Aob_g26933	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27247	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g19265	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.19	OrthoFinder output from all 47 species
Aop_g19707	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.18	OrthoFinder output from all 47 species
Aspi01Gene19490.t1	Aspi01Gene19490	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene50577.t1	Aspi01Gene50577	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0002.g001197	No alias	EC_4.1 carbon-carbon lyase & original description: CDS=250-1512	0.08	OrthoFinder output from all 47 species
Cba_g02480	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
Cba_g19832	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g27257	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.13	OrthoFinder output from all 47 species
Cba_g71534	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.10G074300.1	Ceric.10G074300	EC_4.1 carbon-carbon lyase & original description:...	0.12	OrthoFinder output from all 47 species
Ceric.21G074600.1	Ceric.21G074600	EC_4.1 carbon-carbon lyase & original description:...	0.08	OrthoFinder output from all 47 species
Ceric.28G014000.1	Ceric.28G014000	EC_4.1 carbon-carbon lyase & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.28G025400.1	Ceric.28G025400	EC_4.1 carbon-carbon lyase & original description:...	0.12	OrthoFinder output from all 47 species
Cre05.g234550	FBA2	Cellular respiration.glycolysis.plastidial...	0.06	OrthoFinder output from all 47 species
Dac_g07705	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Dac_g15567	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Dcu_g03595	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Dcu_g16766	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g23406	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g47853	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Dde_g12475	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Dde_g47649	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.11	OrthoFinder output from all 47 species
Ehy_g05600	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01014837001	No alias	Carbohydrate metabolism.sucrose...	0.13	OrthoFinder output from all 47 species
GSVIVT01018820001	FBA2	Cellular respiration.glycolysis.plastidial...	0.1	OrthoFinder output from all 47 species
GSVIVT01024174001	FBA2	Cellular respiration.glycolysis.plastidial...	0.11	OrthoFinder output from all 47 species
Gb_35952	FBA2	fructose 1,6-bisphosphate aldolase....	0.06	OrthoFinder output from all 47 species
LOC_Os06g40640.1	LOC_Os06g40640	aldolase. cytosolic fructose-bisphosphate aldolase	0.08	OrthoFinder output from all 47 species
LOC_Os11g07020.1	FBA2, LOC_Os11g07020	fructose 1,6-bisphosphate aldolase....	0.06	OrthoFinder output from all 47 species
Len_g16110	FBA1	EC_4.1 carbon-carbon lyase & original description: none	0.16	OrthoFinder output from all 47 species
Len_g47300	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Lfl_g01474	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Lfl_g16489	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
Lfl_g29914	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.01	OrthoFinder output from all 47 species
MA_129930g0010	No alias	aldolase. cytosolic fructose-bisphosphate aldolase	0.07	OrthoFinder output from all 47 species
MA_98654g0010	FBA2	fructose 1,6-bisphosphate aldolase....	0.08	OrthoFinder output from all 47 species
Mp2g02260.1	No alias	Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon...	0.11	OrthoFinder output from all 47 species
Mp6g07690.1	FBA2	fructose 1,6-bisphosphate aldolase....	0.07	OrthoFinder output from all 47 species
Msp_g07177	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.18	OrthoFinder output from all 47 species
Msp_g10030	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.11	OrthoFinder output from all 47 species
Ore_g08716	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species	GO:0019646
Pir_g14056	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
Pir_g35474	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g13225	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c25_9350V3.1	Pp3c25_9350	Aldolase superfamily protein	0.01	OrthoFinder output from all 47 species
Ppi_g13106	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Ppi_g29213	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.13	OrthoFinder output from all 47 species
Ppi_g56536	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010642	No alias	EC_4.1 carbon-carbon lyase & original description: CDS=1293-1688	0.04	OrthoFinder output from all 47 species
Sam_g02052	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g26658	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.11	OrthoFinder output from all 47 species
Sam_g38305	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.09	OrthoFinder output from all 47 species
Smo270698	No alias	Cellular respiration.glycolysis.plastidial...	0.05	OrthoFinder output from all 47 species
Solyc01g110360.3.1	FBA2, Solyc01g110360	fructose 1,6-bisphosphate aldolase....	0.05	OrthoFinder output from all 47 species
Solyc02g062340.3.1	FBA2, Solyc02g062340	fructose 1,6-bisphosphate aldolase....	0.11	OrthoFinder output from all 47 species
Solyc02g084440.4.1	FBA2, Solyc02g084440	fructose 1,6-bisphosphate aldolase....	0.04	OrthoFinder output from all 47 species
Solyc07g065900.3.1	Solyc07g065900	aldolase. cytosolic fructose-bisphosphate aldolase	0.03	OrthoFinder output from all 47 species
Spa_g05484	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.15	OrthoFinder output from all 47 species
Spa_g12801	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g16364	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.13	OrthoFinder output from all 47 species
Spa_g16365	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
Tin_g12854	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
Tin_g19078	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.12	OrthoFinder output from all 47 species
Zm00001e024505_P001	FBA2, Zm00001e024505	fructose 1,6-bisphosphate aldolase....	0.04	OrthoFinder output from all 47 species
Zm00001e037446_P001	Zm00001e037446	aldolase. cytosolic fructose-bisphosphate aldolase	0.03	OrthoFinder output from all 47 species
Zm00001e039486_P003	FBA2, Zm00001e039486	fructose 1,6-bisphosphate aldolase....	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006096	glycolytic process	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016832	aldehyde-lyase activity	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000741	FBA_I	70	401

External Links

No external refs found!

Nbi_g11552

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation