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  5. Nbi_g04200

Nbi_g04200


Description : not classified & original description: none


Gene families : OG0006951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00089660 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G23390 No alias CONTAINS InterPro DOMAIN/s: Protein of unknown function... 0.05 OrthoFinder output from all 47 species
Adi_g046400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05861 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g08641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10962 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g10508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G093500.1 Ceric.02G093500 not classified & original description: pacid=50585710... 0.05 OrthoFinder output from all 47 species
Dac_g00868 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14918 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g02179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023154001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os04g36062.1 LOC_Os04g36062 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03272 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g12953 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47469 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g07077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51117 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc01g103110.3.1 Solyc01g103110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g07327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040927_P001 Zm00001e040927 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007434 FemAB-like 84 459
No external refs found!