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  5. Azfi_s0017.g014488

Azfi_s0017.g014488


Description : regulatory protein *(FRIENDLY) of mitochondrion division & original description: CDS=425-4471


Gene families : OG0004309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0017.g014488
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00221290 evm_27.TU.AmTr_v1... Clustered mitochondria protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G52140 No alias tetratricopeptide repeat (TPR)-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g016400 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Aop_g20171 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Ceric.02G073000.1 Ceric.02G073000 regulatory protein *(FRIENDLY) of mitochondrion division... 0.05 OrthoFinder output from all 47 species
Dcu_g04144 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.05 OrthoFinder output from all 47 species
MA_10427006g0010 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g08800.1 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g28877 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Smo442673 No alias Nutrient uptake.iron uptake.iron storage.PIC-type iron... 0.04 OrthoFinder output from all 47 species
Solyc01g086750.4.1 Solyc01g086750 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e015654_P001 Zm00001e015654 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023389_P002 Zm00001e023389 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR028275 CLU_N 143 199
IPR025697 CLU_dom 380 661
IPR033646 CLU-central 762 944
No external refs found!