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  5. Dcu_g28101

Dcu_g28101


Description : ABC-G-type lipid transporter *(STR) & original description: none


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g28101
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00226870 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.08 OrthoFinder output from all 47 species
AT2G39350 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.13 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.13 OrthoFinder output from all 47 species
Dde_g30393 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_19188 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g48614 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49743 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.13 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10426701g0030 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10432886g0010 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35579 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.13 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40770 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Smo90494 No alias External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g40276 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 128 336
No external refs found!