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  5. Dcu_g08281

Dcu_g08281


Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08281

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
AT1G05520 No alias Sec23/Sec24 protein transport family protein 0.05 OrthoFinder output from all 47 species
AT3G23660 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
AT4G14160 No alias Sec23/Sec24 protein transport family protein 0.04 OrthoFinder output from all 47 species
Aev_g02536 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ala_g02545 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Ala_g06426 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Als_g05085 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Als_g14171 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Aob_g05331 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Aop_g18354 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Azfi_s0118.g046613 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Cba_g16653 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Cba_g18092 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Ceric.01G119200.1 Ceric.01G119200 component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.08 OrthoFinder output from all 47 species
Ceric.08G068800.1 Ceric.08G068800 component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Cre03.g180850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Ehy_g01501 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.09 OrthoFinder output from all 47 species
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os08g36994.1 LOC_Os08g36994 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os09g28610.1 LOC_Os09g28610 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
LOC_Os11g24560.1 LOC_Os11g24560 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Lfl_g02282 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
MA_392802g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g15530.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g18554 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Nbi_g05423 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Ore_g15381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25550 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ppi_g04623 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012549 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Sam_g12240 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Smo168140 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
Solyc01g081070.3.1 Solyc01g081070 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Solyc05g053830.3.1 Solyc05g053830 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Solyc09g092680.4.1 Solyc09g092680 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Spa_g17950 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Spa_g53620 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Tin_g03463 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Zm00001e008888_P001 Zm00001e008888 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.06 OrthoFinder output from all 47 species
Zm00001e009959_P002 Zm00001e009959 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e021415_P001 Zm00001e021415 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 520 618
IPR006896 Sec23/24_trunk_dom 121 390
IPR007123 Gelsolin-like_dom 633 720
IPR006895 Znf_Sec23_Sec24 54 92
IPR012990 Sec23_24_beta_S 401 506
No external refs found!