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  5. Dcu_g02968

Dcu_g02968 (SCY1)


Aliases : SCY1

Description : component *(SecY1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0006701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02968
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00172430 SCY1,... Protein translocation.chloroplast.thylakoid membrane... 0.06 OrthoFinder output from all 47 species
AT2G18710 SCY1 SECY homolog 1 0.03 OrthoFinder output from all 47 species
Adi_g009192 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Aev_g07831 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ala_g16589 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Als_g00967 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Aob_g02109 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.12 OrthoFinder output from all 47 species
Aop_g68829 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63607.t1 SCY1, Aspi01Gene63607 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Azfi_s0309.g064070 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Cba_g01145 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ceric.07G059500.1 SCY1, Ceric.07G059500 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Cre16.g681900 SCY1 Protein translocation.chloroplast.thylakoid membrane... 0.04 OrthoFinder output from all 47 species
Dac_g07900 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Dde_g04840 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ehy_g11309 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
GSVIVT01032310001 SCY1 Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
LOC_Os08g15460.1 SCY1, LOC_Os08g15460 component SecY1 of thylakoid membrane Sec1 translocation system 0.04 OrthoFinder output from all 47 species
Len_g09652 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Lfl_g11683 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
MA_10429734g0010 SCY1 component SecY1 of thylakoid membrane Sec1 translocation system 0.06 OrthoFinder output from all 47 species
Mp1g15830.1 SCY1 component SecY1 of thylakoid membrane Sec1 translocation system 0.03 OrthoFinder output from all 47 species
Msp_g14311 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Nbi_g13465 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ore_g11163 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Pnu_g07009 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g04544 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010748 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Sam_g09265 No alias component *(SecY1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Solyc07g006520.3.1 SCY1, Solyc07g006520 component SecY1 of thylakoid membrane Sec1 translocation system 0.1 OrthoFinder output from all 47 species
Spa_g40592 SCY1 component *(SecY1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Zm00001e039903_P001 SCY1, Zm00001e039903 component SecY1 of thylakoid membrane Sec1 translocation system 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 197 528
No external refs found!