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  5. Spa_g17275

Spa_g17275 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : non-photochemical quenching PsbS protein & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17275

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00154940 NPQ4, PSBS,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT1G44575 NPQ4, PSBS Chlorophyll A-B binding family protein 0.12 OrthoFinder output from all 47 species
Adi_g083731 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Adi_g083732 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Adi_g083733 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Aev_g49065 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Ala_g13911 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Als_g10582 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Aob_g38592 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000408 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Cba_g01831 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Ceric.36G021200.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cre16.g667250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g26756 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Dcu_g00800 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.12 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Ehy_g06548 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008866001 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.11 OrthoFinder output from all 47 species
Gb_30734 NPQ4, PSBS non-photochemical quenching PsbS protein 0.04 OrthoFinder output from all 47 species
LOC_Os01g64960.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.08 OrthoFinder output from all 47 species
Len_g07934 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.09 OrthoFinder output from all 47 species
Lfl_g30875 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.08 OrthoFinder output from all 47 species
Mp8g05910.1 NPQ4, PSBS non-photochemical quenching PsbS protein 0.03 OrthoFinder output from all 47 species
Nbi_g04085 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Ore_g05767 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.11 OrthoFinder output from all 47 species
Ore_g31160 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Ore_g32353 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Pir_g51143 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Pnu_g07004 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Pnu_g19930 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02820 NPQ4, PSBS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48261 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Tin_g11495 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.1 OrthoFinder output from all 47 species
Zm00001e019137_P001 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!