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  5. Spa_g12563

Spa_g12563


Description : lipoamide-containing component *(H-protein) of glycine cleavage system & original description: none


Gene families : OG0002114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12563

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00054540 evm_27.TU.AmTr_v1... Photosynthesis.photorespiration.glycine cleavage... 0.13 OrthoFinder output from all 47 species
AT1G32470 No alias Single hybrid motif superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G35370 GDCH glycine decarboxylase complex H 0.08 OrthoFinder output from all 47 species
Adi_g019861 No alias lipoamide-containing component *(H-protein) of glycine... 0.12 OrthoFinder output from all 47 species
Adi_g094450 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102943 No alias lipoamide-containing component *(H-protein) of glycine... 0.13 OrthoFinder output from all 47 species
Aev_g23460 No alias lipoamide-containing component *(H-protein) of glycine... 0.15 OrthoFinder output from all 47 species
Ala_g16182 No alias lipoamide-containing component *(H-protein) of glycine... 0.13 OrthoFinder output from all 47 species
Als_g00184 No alias lipoamide-containing component *(H-protein) of glycine... 0.12 OrthoFinder output from all 47 species
Aob_g05607 GDCH lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Aop_g01914 No alias lipoamide-containing component *(H-protein) of glycine... 0.21 OrthoFinder output from all 47 species
Azfi_s0093.g043340 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Cba_g14008 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Ceric.01G108100.1 Ceric.01G108100 lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Ceric.26G032600.1 Ceric.26G032600 lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.27 No alias Photosynthesis.photorespiration.glycine cleavage... 0.01 OrthoFinder output from all 47 species
Cre06.g253350 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
Dac_g00295 No alias lipoamide-containing component *(H-protein) of glycine... 0.18 OrthoFinder output from all 47 species
Dcu_g46571 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Dde_g02618 No alias lipoamide-containing component *(H-protein) of glycine... 0.11 OrthoFinder output from all 47 species
Ehy_g00941 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
GSVIVT01013175001 No alias Photosynthesis.photorespiration.glycine cleavage... 0.09 OrthoFinder output from all 47 species
Gb_37034 GDCH lipoamide-containing component H-protein of glycine... 0.1 OrthoFinder output from all 47 species
LOC_Os10g37180.1 LOC_Os10g37180 lipoamide-containing component H-protein of glycine... 0.09 OrthoFinder output from all 47 species
Len_g25183 No alias lipoamide-containing component *(H-protein) of glycine... 0.13 OrthoFinder output from all 47 species
Lfl_g02714 No alias lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
MA_20265g0010 No alias lipoamide-containing component H-protein of glycine... 0.04 OrthoFinder output from all 47 species
Mp3g05780.1 No alias lipoamide-containing component H-protein of glycine... 0.09 OrthoFinder output from all 47 species
Msp_g00128 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Nbi_g01783 No alias lipoamide-containing component *(H-protein) of glycine... 0.14 OrthoFinder output from all 47 species
Ore_g27877 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Ore_g40804 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Pir_g02729 No alias lipoamide-containing component *(H-protein) of glycine... 0.14 OrthoFinder output from all 47 species
Pp3c19_11600V3.1 Pp3c19_11600 Single hybrid motif superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g08906 No alias lipoamide-containing component *(H-protein) of glycine... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006297 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Sam_g08374 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Smo113331 No alias Photosynthesis.photorespiration.glycine cleavage... 0.05 OrthoFinder output from all 47 species
Solyc06g061070.3.1 Solyc06g061070 lipoamide-containing component H-protein of glycine... 0.02 OrthoFinder output from all 47 species
Solyc08g007040.3.1 GDCH, Solyc08g007040 lipoamide-containing component H-protein of glycine... 0.02 OrthoFinder output from all 47 species
Tin_g09642 No alias lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Zm00001e039579_P001 GDCH, Zm00001e039579 lipoamide-containing component H-protein of glycine... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033753 GCV_H/Fam206 34 153
No external refs found!