Ore_g25581


Description : clathrin uncoating protein *(AUL) & original description: none


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25581

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00222440 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT4G12770 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055215 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20496 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11487 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07595 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42812.t1 Aspi01Gene42812 clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011410 No alias clathrin uncoating protein *(AUL) & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G030600.1 Ceric.22G030600 clathrin uncoating protein *(AUL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.22G037800.1 Ceric.22G037800 not classified & original description: pacid=50614532... 0.04 OrthoFinder output from all 47 species
Dcu_g11003 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07965 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26361 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03944 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10033 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022322001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Gb_06489 No alias clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
Len_g12304 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g16226 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40756 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26480 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47514 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039690_P002 Zm00001e039690 clathrin uncoating protein (AUL) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!