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  5. Ore_g20912

Ore_g20912


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20912

Target Alias Description ECC score Gene Family Method Actions
AT5G12470 No alias Protein of unknown function (DUF3411) 0.01 OrthoFinder output from all 47 species
Adi_g048192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g048193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g27483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06534.t1 Aspi01Gene06534 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.04 OrthoFinder output from all 47 species
Ceric.29G029100.1 Ceric.29G029100 not classified & original description: pacid=50624979... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.104 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g06291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_17057 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.09 OrthoFinder output from all 47 species
Len_g11651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10212503g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429062g0010 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_76219g0030 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp6g12840.1 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38821 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g07921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.03 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo71514 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 487 670
IPR007314 Cofac_haem-bd_dom 161 380
No external refs found!