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  5. AMTR_s00014p00254440

AMTR_s00014p00254440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.138

No description available


Gene families : OG0001003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00254440

Target Alias Description ECC score Gene Family Method Actions
AT5G18260 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Cba_g36914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009771001 No alias No description available 0.03 OrthoFinder output from all 47 species
Sam_g07404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017285_P001 Zm00001e017285 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025549_P001 Zm00001e025549 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!