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  5. Cre13.g603900

Cre13.g603900


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.beta subunit


Gene families : OG0005200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g603900
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aev_g05341 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.01 OrthoFinder output from all 47 species
Ala_g07032 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.02 OrthoFinder output from all 47 species
Aop_g14148 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0032.g024823 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.04 OrthoFinder output from all 47 species
Cba_g09046 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.04 OrthoFinder output from all 47 species
Ceric.07G036000.1 Ceric.07G036000 subunit beta of phenylalanine-tRNA ligase complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.35 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Dcu_g04791 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008188001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Gb_05062 No alias subunit beta of phenylalanine-tRNA ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g48510.1 LOC_Os05g48510 subunit beta of phenylalanine-tRNA ligase complex 0.05 OrthoFinder output from all 47 species
Mp8g07720.1 No alias subunit beta of phenylalanine-tRNA ligase complex 0.08 OrthoFinder output from all 47 species
Nbi_g01273 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g14467 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.02 OrthoFinder output from all 47 species
Sam_g26328 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g008310.4.1 Solyc01g008310 subunit beta of phenylalanine-tRNA ligase complex 0.03 OrthoFinder output from all 47 species
Spa_g30088 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.02 OrthoFinder output from all 47 species
Tin_g02009 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e029739_P002 Zm00001e029739 subunit beta of phenylalanine-tRNA ligase complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005147 tRNA_synthase_B5-dom 322 387
IPR005146 B3/B4_tRNA-bd 130 291
No external refs found!