1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g010864

Cre01.g010864 (ATPRFB, HCF109)


Aliases : ATPRFB, HCF109

Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g010864
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00184560 ATPRFB, HCF109,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.03 OrthoFinder output from all 47 species
Adi_g040965 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23943.t1 ATPRFB, HCF109,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0252.g060375 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.01 OrthoFinder output from all 47 species
Cba_g23243 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Ceric.36G013000.1 ATPRFB, HCF109,... translation peptide chain release factor *(PrfB) &... 0.04 OrthoFinder output from all 47 species
Dcu_g09191 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Ehy_g09038 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.01 OrthoFinder output from all 47 species
LOC_Os07g36250.1 ATPRFB, HCF109,... PrfB-type translation peptide chain release factor 0.02 OrthoFinder output from all 47 species
Lfl_g12599 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
MA_10437191g0010 ATPRFB, HCF109 PrfB-type translation peptide chain release factor 0.06 OrthoFinder output from all 47 species
Mp7g15060.1 ATPRFB, HCF109 PrfB-type translation peptide chain release factor 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002336 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Smo430253 ATPRFB, HCF109 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Solyc04g025290.4.1 ATPRFB, HCF109,... PrfB-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species
Spa_g09555 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR005139 PCRF 187 392
IPR000352 Pep_chain_release_fac_I 405 512
No external refs found!