Description : ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana
Gene families : OG0001881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001881_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01010750001 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00202840 | evm_27.TU.AmTr_v1... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00066p00084950 | evm_27.TU.AmTr_v1... | ATPase family AAA domain-containing protein At1g05910... | 0.05 | OrthoFinder output from all 47 species | |
AT1G05910 | No alias | cell division cycle protein 48-related / CDC48-related | 0.04 | OrthoFinder output from all 47 species | |
Adi_g060029 | No alias | component *(BRAT1) of anti-silencing regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g10813 | No alias | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g18310 | No alias | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0006.g010210 | No alias | component *(BRAT1) of anti-silencing regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g04982 | No alias | component *(BRAT1) of anti-silencing regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01014274001 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.04 | OrthoFinder output from all 47 species | |
Gb_05160 | No alias | ATPase family AAA domain-containing protein At1g05910... | 0.05 | OrthoFinder output from all 47 species | |
Gb_11471 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g47800.1 | LOC_Os01g47800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g33980.1 | LOC_Os09g33980 | ATPase family AAA domain-containing protein At1g05910... | 0.03 | OrthoFinder output from all 47 species | |
Len_g11424 | No alias | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g18945 | No alias | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
MA_10432357g0010 | No alias | ATPase family AAA domain-containing protein At1g05910... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29677 | No alias | component *(BRAT1) of anti-silencing regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034695_P003 | Zm00001e034695 | ATPase family AAA domain-containing protein At1g05910... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | HCCA |
MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006382 | adenosine to inosine editing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |