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  5. Solyc03g058880.4.1

Solyc03g058880.4.1 (Solyc03g058880)


Aliases : Solyc03g058880

Description : Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis (sp|b9run8|guf1_ricco : 1080.0)


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g058880.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00125670 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, mitochondrial... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00125860 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, mitochondrial... 0.03 OrthoFinder output from all 47 species
Aev_g08919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10814.t1 Aspi01Gene10814 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z026100.1 Ceric.1Z026100 not classified & original description: pacid=50582259... 0.06 OrthoFinder output from all 47 species
Cre03.g174000 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 OrthoFinder output from all 47 species
GSVIVT01011357001 No alias Translation factor GUF1 homolog, mitochondrial... 0.05 OrthoFinder output from all 47 species
LOC_Os06g05250.2 LOC_Os06g05250 Translation factor GUF1 homolog, mitochondrial OS=Oryza... 0.04 OrthoFinder output from all 47 species
Mp3g15370.1 No alias Translation factor GUF1 homolog, mitochondrial... 0.04 OrthoFinder output from all 47 species
Zm00001e036519_P002 Zm00001e036519 Translation factor GUF1 homolog, mitochondrial... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013842 LepA_CTD 552 658
IPR000795 T_Tr_GTP-bd_dom 63 244
IPR000640 EFG_V-like 465 550
No external refs found!