Aliases : SAR1, ATNUP160, NUP160
Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin
Gene families : OG0004742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo445056 | |
Cluster | HCCA: Cluster_66 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00041p00138020 | SAR1, ATNUP160,... | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
AT1G33410 | SAR1, ATNUP160, NUP160 | SUPPRESSOR OF AUXIN RESISTANCE1 | 0.09 | OrthoFinder output from all 47 species | |
Aev_g48633 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g07840 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g324000 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g09396 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g09122 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g04055 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015912001 | SAR1, ATNUP160, NUP160 | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36285 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
Gb_36286 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g04970.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
MA_10430989g0010 | SAR1, ATNUP160, NUP160 | Nuclear pore complex protein NUP160 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
MA_10436566g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_33415g0010 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
Mp8g11350.1 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
Msp_g14433 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g16275 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g102540.3.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
Tin_g09156 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013640_P002 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006188 | IMP biosynthetic process | IEP | HCCA |
BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046040 | IMP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |