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  5. LOC_Os01g14830.1

LOC_Os01g14830.1 (RPL3P, LOC_Os01g14830)


Aliases : RPL3P, LOC_Os01g14830

Description : component mtRPL3 of large ribosomal subunit proteome


Gene families : OG0005827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g14830.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00094390 RPL3P,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT3G17465 RPL3P ribosomal protein L3 plastid 0.04 OrthoFinder output from all 47 species
Als_g04883 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g02098 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007996 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cba_g02523 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.33G054400.1 RPL3P, Ceric.33G054400 component *(uL3m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre01.g022250 RPL3P Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
GSVIVT01017688001 RPL3P Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_28367 RPL3P component mtRPL3 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
MA_14906g0010 RPL3P component mtRPL3 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
MA_16256g0010 RPL3P 50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Mp4g00030.1 RPL3P component mtRPL3 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Pp3c23_18210V3.1 RPL3P, Pp3c23_18210 ribosomal protein L3 plastid 0.03 OrthoFinder output from all 47 species
Sam_g07642 No alias component *(uL3m) of large mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g07643 No alias component *(uL3m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Smo145395 RPL3P Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Spa_g06067 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g14446 RPL3P component *(uL3m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e025590_P001 RPL3P, Zm00001e025590 component mtRPL3 of large ribosomal subunit proteome 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 157 254
No external refs found!