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Description : Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0)
Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436966g0010 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00088750 | evm_27.TU.AmTr_v1... | Protein TSS OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00245460 | evm_27.TU.AmTr_v1... | Protein TSS OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G01320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G28080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g15019 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g46749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14003 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g21641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08477 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g26369 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene56297.t1 | Aspi01Gene56297 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72080.t1 | Aspi01Gene72080 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0031.g024493 | No alias | not classified & original description: CDS=852-6302 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16051 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g37897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G017100.1 | Ceric.12G017100 | not classified & original description: pacid=50600997... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.26G072500.1 | Ceric.26G072500 | not classified & original description: pacid=50600348... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31539 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g34188 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12674 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04071 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023693001 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023694001 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20706 | No alias | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 386.0) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g55230.1 | LOC_Os04g55230 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g23990.1 | LOC_Os07g23990 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g20505 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38813 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07995 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27550 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14901 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g56916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19748 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19896 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g33780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16281 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g16287 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03731 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35286 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo10032 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Smo442478 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g050630.4.1 | Solyc05g050630 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g068230.4.1 | Solyc06g068230 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g006030.4.1 | Solyc07g006030 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g02169 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22658 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g47021 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g50937 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g56345 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g08453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016102_P002 | Zm00001e016102 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033372_P001 | Zm00001e033372 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006826 | iron ion transport | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |