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  5. MA_10428945g0010

MA_10428945g0010


Description : PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana (sp|o49292|ppd4_arath : 271.0)


Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428945g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.07 OrthoFinder output from all 47 species
Aev_g31777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57621.t1 Aspi01Gene57621 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G021700.1 Ceric.35G021700 not classified & original description: pacid=50580848... 0.07 OrthoFinder output from all 47 species
Dcu_g14466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04309 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01010018001 No alias PsbP domain-containing protein 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os12g08830.1 LOC_Os12g08830 PsbP domain-containing protein 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g04660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 54 196
No external refs found!