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Aliases : UPL3, KAK
Description : monomeric E3 ubiquitin ligase (HECT)
Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10426439g0010 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00100p00119160 | UPL3, KAK,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G38600 | UPL3, KAK | HEAT repeat ;HECT-domain (ubiquitin-transferase) | 0.08 | OrthoFinder output from all 47 species | |
| AT5G02880 | UPL4 | ubiquitin-protein ligase 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077989 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g08003 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g49450 | UPL3, KAK | LRR-domain extensin & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g02725 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g14715 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19314 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g47900 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g20762 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g08791 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene47695.t1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene47697.t2 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008108 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: CDS=419-6391 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g14867 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G061600.1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G085400.1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Cre07.g312900 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03421 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20263 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g21337 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018731001 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01024033001 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07121 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.09 | OrthoFinder output from all 47 species | |
| Gb_07122 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_20276 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_20277 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.09 | OrthoFinder output from all 47 species | |
| Gb_20278 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g01170.1 | UPL3, KAK, LOC_Os02g01170 | monomeric E3 ubiquitin ligase (HECT) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g18323 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19132 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g02474 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g24750.1 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g13561 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25162 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25807 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g41653 | UPL3, KAK | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12252 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29297 | No alias | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo146155 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g111530.3.1 | UPL3, KAK, Solyc01g111530 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g055450.2.1 | UPL3, KAK, Solyc10g055450 | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g06979 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55031 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02200 | UPL3, KAK | E3 ubiquiTin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008508_P001 | UPL3, KAK, Zm00001e008508 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013385_P003 | UPL3, KAK, Zm00001e013385 | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e025424_P001 | UPL3, KAK, Zm00001e025424 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006013 | mannose metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015923 | mannosidase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |