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  5. Mp1g29210.1

Mp1g29210.1 (GATB)


Aliases : GATB

Description : component GatB of glutamyl-tRNA-dependent amidotransferase complex


Gene families : OG0003791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g29210.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00150510 GATB,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
AT1G48520 GATB GLU-ADT subunit B 0.1 OrthoFinder output from all 47 species
Aev_g01284 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Aob_g15473 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.01 OrthoFinder output from all 47 species
Aop_g03519 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079300.1 GATB, Ceric.1Z079300 component *(GatB) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000178.59 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Cre14.g627488 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.07 OrthoFinder output from all 47 species
Dac_g09585 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.01 OrthoFinder output from all 47 species
Dcu_g32346 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Ehy_g02738 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01027937001 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027938001 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.09 OrthoFinder output from all 47 species
LOC_Os11g34210.2 GATB, LOC_Os11g34210 component GatB of glutamyl-tRNA-dependent... 0.08 OrthoFinder output from all 47 species
Len_g18271 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Lfl_g11055 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
MA_6978g0020 GATB component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
MA_889802g0010 GATB component GatB of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Msp_g15572 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Nbi_g13336 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Ore_g17992 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Ppi_g01136 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025293 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g09704 No alias component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Smo441971 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Solyc09g090840.3.1 GATB, Solyc09g090840 component GatB of glutamyl-tRNA-dependent... 0.12 OrthoFinder output from all 47 species
Spa_g37335 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e024183_P002 GATB, Zm00001e024183 component GatB of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 105 399
IPR018027 Asn/Gln_amidotransferase 438 584
No external refs found!