Zm00001e036922_P004 (Zm00001e036922)

Aliases : Zm00001e036922

Description : carboxy-terminal processing peptidase (CtpA)

Gene families : OG0001069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001069_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e036922_P004
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00242310	evm_27.TU.AmTr_v1...	Protein modification.peptide maturation.plastid.CtpA...	0.04	OrthoFinder output from all 47 species
Adi_g057553	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Aev_g16409	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Ala_g06322	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Als_g01017	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Aob_g05172	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.05	OrthoFinder output from all 47 species
Aop_g05384	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Aop_g14243	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene57074.t1	Aspi01Gene57074	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Cba_g08933	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Cba_g18332	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000900.16	No alias	Carboxyl-terminal-processing peptidase 2, chloroplastic...	0.05	OrthoFinder output from all 47 species
Dac_g07450	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Dac_g16305	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g12612	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Dde_g11824	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.06	OrthoFinder output from all 47 species
Dde_g22620	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g04853	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g07816	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19495	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g30564	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01033332001	No alias	Protein modification.peptide maturation.plastid.CtpA...	0.02	OrthoFinder output from all 47 species
Gb_10272	No alias	carboxy-terminal processing peptidase (CtpA)	0.03	OrthoFinder output from all 47 species
LOC_Os01g47450.1	LOC_Os01g47450	carboxy-terminal processing peptidase (CtpA)	0.02	OrthoFinder output from all 47 species
LOC_Os06g21380.1	LOC_Os06g21380	carboxy-terminal processing peptidase (CtpA)	0.06	OrthoFinder output from all 47 species
Len_g01280	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Len_g15226	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g10534	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.06	OrthoFinder output from all 47 species
MA_10432212g0020	No alias	Carboxyl-terminal-processing peptidase 1, chloroplastic...	0.01	OrthoFinder output from all 47 species
MA_9699654g0010	No alias	Carboxyl-terminal-processing peptidase 2, chloroplastic...	0.01	OrthoFinder output from all 47 species
Mp6g10620.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.02	OrthoFinder output from all 47 species
Mp7g16940.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.04	OrthoFinder output from all 47 species
Msp_g07773	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.06	OrthoFinder output from all 47 species
Ore_g20885	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Pir_g04557	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.04	OrthoFinder output from all 47 species
Pp3c5_6160V3.1	Pp3c5_6160	Peptidase S41 family protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014864	No alias	not classified & original description: CDS=20-1393	0.03	OrthoFinder output from all 47 species
Sam_g19129	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.04	OrthoFinder output from all 47 species
Solyc12g097030.2.1	Solyc12g097030	carboxy-terminal processing peptidase (CtpA)	0.03	OrthoFinder output from all 47 species
Spa_g07720	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Spa_g15401	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species
Spa_g16639	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16834	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02707	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.03	OrthoFinder output from all 47 species
Tin_g13798	No alias	carboxy-terminal processing peptidase *(CtpA) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
CC	GO:0005849	mRNA cleavage factor complex	IEP	HCCA
BP	GO:0006378	mRNA polyadenylation	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041489	PDZ_6	219	266
IPR005151	Tail-specific_protease	312	474

External Links

No external refs found!

Zm00001e036922_P004 (Zm00001e036922)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation