1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025157_P002

Zm00001e025157_P002 (HVE, TIP120, CAND1,...)


Aliases : HVE, TIP120, CAND1, ATCAND1, ETA2, Zm00001e025157

Description : adaptor protein exchange factor (CAND1)


Gene families : OG0003255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025157_P002
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00129340 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.06 OrthoFinder output from all 47 species
AMTR_s00099p00130090 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g087197 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g14845 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Als_g29146 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.06 OrthoFinder output from all 47 species
Als_g29147 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.06 OrthoFinder output from all 47 species
Aob_g12797 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene20614.t1 HVE, TIP120,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001330 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g27198 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g36152 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G074400.1 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.39 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Cre03.g177053 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.05 OrthoFinder output from all 47 species
Dcu_g04133 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.07 OrthoFinder output from all 47 species
Dde_g01757 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01023143001 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_04165 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.08 OrthoFinder output from all 47 species
LOC_Os02g07120.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.13 OrthoFinder output from all 47 species
Len_g10725 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g08338 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.07 OrthoFinder output from all 47 species
MA_15038g0010 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species
Mp1g02440.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.03 OrthoFinder output from all 47 species
Msp_g13620 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g06332 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g20444 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g17423 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012698 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g26565 No alias adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Smo165037 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.07 OrthoFinder output from all 47 species
Solyc01g103010.4.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.08 OrthoFinder output from all 47 species
Spa_g15706 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.08 OrthoFinder output from all 47 species
Spa_g26194 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01276 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013932 TATA-bd_TIP120 1040 1199
No external refs found!