Aliases : Zm00001e024670
Description : proline-tRNA ligase
Gene families : OG0001971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001971_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e024670_P003 | |
Cluster | HCCA: Cluster_183 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00127050 | evm_27.TU.AmTr_v1... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
AT3G62120 | No alias | Class II aaRS and biotin synthetases superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
AT5G52520 | OVA6, PRORS1 | Class II aaRS and biotin synthetases superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05302 | No alias | proline-tRNA ligase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Aop_g11327 | No alias | proline-tRNA ligase & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ceric.34G026500.1 | Ceric.34G026500 | proline-tRNA ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001576.14 | OVA6, PRORS1 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001576.15 | OVA6, PRORS1 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021463.3 | OVA6, PRORS1 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g406200 | OVA6, PRORS1 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
Cre10.g429100 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g02781 | No alias | proline-tRNA ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g00716 | No alias | proline-tRNA ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028250001 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g25710.1 | LOC_Os12g25710 | proline-tRNA ligase | 0.12 | OrthoFinder output from all 47 species | |
Len_g01828 | No alias | proline-tRNA ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_19799g0010 | No alias | proline-tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
MA_67556g0010 | No alias | Proline--tRNA ligase, cytoplasmic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp2g25470.1 | No alias | proline-tRNA ligase | 0.08 | OrthoFinder output from all 47 species | |
Msp_g03194 | No alias | proline-tRNA ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g12513 | No alias | proline-tRNA ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08357 | OVA6, PRORS1 | proline-tRNA ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g01128 | No alias | proline-tRNA ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g11315 | No alias | proline-tRNA ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo74713 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g068320.3.1 | Solyc06g068320 | proline-tRNA ligase | 0.05 | OrthoFinder output from all 47 species | |
Spa_g09904 | No alias | proline-tRNA ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g15505 | No alias | proline-tRNA ligase & original description: none | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | Interproscan |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
MF | GO:0004827 | proline-tRNA ligase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | Interproscan |
BP | GO:0006433 | prolyl-tRNA aminoacylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005047 | signal recognition particle binding | IEP | HCCA |
MF | GO:0005048 | signal sequence binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | HCCA |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006432 | phenylalanyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
MF | GO:0042277 | peptide binding | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
CC | GO:0048500 | signal recognition particle | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |