1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e023945_P001

Zm00001e023945_P001 (UBA1, MOS5, ATUBA1,...)


Aliases : UBA1, MOS5, ATUBA1, Zm00001e023945

Description : ubiquitin-activating E1 protein


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023945_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00065050 UBA1, MOS5,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT2G30110 UBA1, MOS5, ATUBA1 ubiquitin-activating enzyme 1 0.06 OrthoFinder output from all 47 species
AT5G06460 ATUBA2, UBA 2 ubiquitin activating enzyme 2 0.03 OrthoFinder output from all 47 species
Adi_g081325 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18272 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02615 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05605 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2414.g111293 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g62755 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G062100.1 UBA1, MOS5,... E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.43 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre09.g386400 ATUBA2, UBA 2 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_00042 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g18380.3 ATUBA2, UBA 2,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
LOC_Os11g01510.2 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
MA_10436758g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
MA_107903g0010 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Mp4g15300.1 ATUBA2, UBA 2 ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Mp7g08080.1 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
Ore_g27854 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11819 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015761 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g12365 No alias E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25172 No alias E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Smo179776 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Solyc09g018450.3.1 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Spa_g44854 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11189 UBA1, MOS5, ATUBA1 E1 ubiquiTin-activaTing enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035939_P002 ATUBA2, UBA 2,... ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032418 E1_FCCH 228 298
IPR032420 E1_4HB 300 369
IPR019572 UBA_E1_SCCH 638 891
IPR000594 ThiF_NAD_FAD-bd 451 951
IPR000594 ThiF_NAD_FAD-bd 55 430
IPR018965 Ub-activating_enz_E1_C 962 1051
No external refs found!