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  5. Zm00001e013321_P002

Zm00001e013321_P002 (SBE2.2, Zm00001e013321)


Aliases : SBE2.2, Zm00001e013321

Description : starch branching enzyme


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013321_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00188540 SBE2.2,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.04 OrthoFinder output from all 47 species
Adi_g080095 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01532 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08813 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G017100.1 SBE2.2, Ceric.17G017100 EC_2.4 glycosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000981.14 SBE2.2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cre06.g289850 SBE2.2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cre10.g444700 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Dde_g25153 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008673001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
GSVIVT01033801001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32660.1 SBE2.2, LOC_Os02g32660 starch branching enzyme 0.03 OrthoFinder output from all 47 species
LOC_Os06g51084.1 SBE2.2, LOC_Os06g51084 starch branching enzyme 0.03 OrthoFinder output from all 47 species
MA_15024g0020 SBE2.2 1,4-alpha-glucan-branching enzyme 1,... 0.05 OrthoFinder output from all 47 species
Mp7g15230.1 SBE2.2 starch branching enzyme 0.05 OrthoFinder output from all 47 species
Pir_g53150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g082400.3.1 SBE2.2, Solyc04g082400 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Solyc09g009190.4.1 SBE2.2, Solyc09g009190 starch branching enzyme 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 299 368
IPR004193 Glyco_hydro_13_N 129 208
IPR006048 A-amylase/branching_C 663 763
No external refs found!