Aliases : EMB86, EMB1030, EMB263
Description : alanine-tRNA ligase
Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_36215 | |
Cluster | HCCA: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G22800 | EMB86, EMB1030, EMB263 | Alanyl-tRNA synthetase, class IIc | 0.12 | OrthoFinder output from all 47 species | |
Adi_g107925 | ACD, ALATS | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g15227 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g13265 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.13 | OrthoFinder output from all 47 species | |
Als_g05106 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g06066 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g08353 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Aspi01Gene12707.t1 | EMB86, EMB1030,... | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g14026 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.20G012400.1 | EMB86, EMB1030,... | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Cre08.g368900 | EMB86, EMB1030, EMB263 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g09278 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08939 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g11577 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g20259 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023918001 | EMB86, EMB1030, EMB263 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os06g13660.1 | EMB86, EMB1030,... | alanine-tRNA ligase | 0.08 | OrthoFinder output from all 47 species | |
Len_g17359 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Len_g18936 | ACD, ALATS | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g12875 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.09 | OrthoFinder output from all 47 species | |
MA_10282308g0010 | EMB86, EMB1030, EMB263 | alanine-tRNA ligase | 0.08 | OrthoFinder output from all 47 species | |
Nbi_g21729 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g04464 | ACD, ALATS | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g08778 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g64933 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g26458 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g56809 | EMB86, EMB1030, EMB263 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0075.g017335 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26484 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Solyc01g111990.3.1 | EMB86, EMB1030,... | alanine-tRNA ligase | 0.08 | OrthoFinder output from all 47 species | |
Spa_g39932 | EMB86, EMB1030, EMB263 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e036036_P002 | EMB86, EMB1030,... | alanine-tRNA ligase | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | Interproscan |
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
MF | GO:0004813 | alanine-tRNA ligase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEA | Interproscan |
BP | GO:0043039 | tRNA aminoacylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006536 | glutamate metabolic process | IEP | HCCA |
BP | GO:0006537 | glutamate biosynthetic process | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | HCCA |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015930 | glutamate synthase activity | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
BP | GO:0017038 | protein import | IEP | HCCA |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0106413 | dihydrouridine synthase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |