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  5. Gb_36197

Gb_36197 (CPSAR1, EMB269, ATOBGC)


Aliases : CPSAR1, EMB269, ATOBGC

Description : GTP-binding protein OBGC, chloroplastic OS=Arabidopsis thaliana (sp|q8l7l0|obgc_arath : 598.0)


Gene families : OG0006728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36197
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00188930 CPSAR1, EMB269,... GTP-binding protein OBGC, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G18570 CPSAR1, EMB269, ATOBGC GTP1/OBG family protein 0.11 OrthoFinder output from all 47 species
Aop_g21160 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051498 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Cba_g14040 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Ceric.37G033700.1 CPSAR1, EMB269,... regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Cre10.g433100 CPSAR1, EMB269, ATOBGC Probable GTP-binding protein OBGC1, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os07g47300.1 CPSAR1, EMB269,... Probable GTP-binding protein OBGC1, chloroplastic... 0.07 OrthoFinder output from all 47 species
MA_10437260g0010 CPSAR1, EMB269, ATOBGC GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g07180.1 CPSAR1, EMB269, ATOBGC Probable GTP-binding protein OBGC1, chloroplastic... 0.07 OrthoFinder output from all 47 species
Nbi_g07105 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Ore_g16896 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ppi_g32957 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007234 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Solyc01g067530.3.1 CPSAR1, EMB269,... GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015349 OCT_dom 576 645
IPR006073 GTP-bd 374 494
IPR006169 GTP1_OBG_dom 215 371
No external refs found!