1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000144.156

Cpa|evm.model.tig00000144.156


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase


Gene families : OG0005601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005601_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.156
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g010013 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Cre12.g522350 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
GSVIVT01020576001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
LOC_Os12g35570.1 LOC_Os12g35570 tryptophan-tRNA ligase 0.03 OrthoFinder output from all 47 species
MA_59029g0010 No alias Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g17515 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 139 231
No external refs found!