AT5G60690 (IFL1, IFL, REV)

Aliases : IFL1, IFL, REV

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G60690

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00148p00033940	PHB-1D, ATHB-14,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AMTR_s00155p00069240	PHB-1D, ATHB-14,...	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
Aev_g11869	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g11870	PHB-1D, ATHB-14,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g36023	PHB-1D, ATHB-14,...	transcriptional co-regulator *(ZPR) & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g37323	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04492	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g12371	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06579	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07212	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09861	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g14341	HB-8, ATHB8, ATHB-8	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g17712	ICU4, ATHB15,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g27486	ICU4, ATHB15,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g33687	HB-8, ATHB8, ATHB-8	HD-ZIP III-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g39406	PHB-1D, ATHB-14,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g50584	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22190	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g34188	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g06100	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07101	PHB-1D, ATHB-14,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g37722	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47508.t1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56782.t1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g22007	HB-8, ATHB8, ATHB-8	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g22860	PHB-1D, ATHB-14,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g23262	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g28120	PHB-1D, ATHB-14,...	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Cba_g60655	ICU4, ATHB15,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g65945	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.07G076100.1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.17G020900.1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original...	0.08	OrthoFinder output from all 47 species
Ceric.18G068400.1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original...	0.08	OrthoFinder output from all 47 species
Ceric.23G045900.1	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original...	0.03	OrthoFinder output from all 47 species
Dac_g12691	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47759	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26929	HB-8, ATHB8, ATHB-8	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10870	ICU4, ATHB15,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12681	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01017010001	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01021625001	PHB-1D, ATHB-14,...	RNA biosynthesis.transcriptional activation.HB...	0.07	OrthoFinder output from all 47 species
GSVIVT01025193001	IFL1, IFL, REV	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
GSVIVT01035612001	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_10259	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.02	OrthoFinder output from all 47 species
Gb_22761	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.02	OrthoFinder output from all 47 species
LOC_Os03g43930.1	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
LOC_Os12g41860.1	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.06	OrthoFinder output from all 47 species
Len_g10271	HB-8, ATHB8, ATHB-8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19005	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Len_g50048	ICU4, ATHB15,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g26487	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_110407g0010	HB-8, ATHB8, ATHB-8	Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_112057g0010	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.03	OrthoFinder output from all 47 species
Mp1g24140.1	HB-8, ATHB8, ATHB-8	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Msp_g02849	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19565	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02329	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021492	HB-8, ATHB8, ATHB-8	not classified & original description: CDS=1-1650	0.03	OrthoFinder output from all 47 species
Sam_g10819	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g12564	No alias	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39110	No alias	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Smo270954	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
Solyc02g024070.3.1	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Solyc08g066500.4.1	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.03	OrthoFinder output from all 47 species
Spa_g22208	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g49880	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e000073_P001	IFL1, IFL, REV,...	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Zm00001e004553_P004	IFL1, IFL, REV,...	transcription factor (HD-ZIP III)	0.07	OrthoFinder output from all 47 species
Zm00001e005034_P001	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Zm00001e012408_P002	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.03	OrthoFinder output from all 47 species
Zm00001e018118_P002	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Zm00001e039093_P002	IFL1, IFL, REV,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	ISS	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	IMP	Interproscan
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IMP	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0009956	radial pattern formation	IMP	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	IMP	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	IMP	Interproscan
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	IMP	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
MF	GO:0008805	carbon-monoxide oxygenase activity	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0009624	response to nematode	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009955	adaxial/abaxial pattern specification	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0016441	post-transcriptional gene silencing	IEP	HCCA
MF	GO:0016622	oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0061062	regulation of nematode larval development	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
BP	GO:0080060	integument development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	25	83
IPR002913	START_lipid-bd_dom	161	367
IPR013978	MEKHLA	694	841

External Links

No external refs found!

AT5G60690 (IFL1, IFL, REV)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation