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  5. AT4G17330

AT4G17330 (G2484-1, ATG2484-1)


Aliases : G2484-1, ATG2484-1

Description : G2484-1 protein


Gene families : OG0002573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00148070 G2484-1,... No description available 0.07 OrthoFinder output from all 47 species
Adi_g077944 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g087228 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07336 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27665 G2484-1, ATG2484-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12999 G2484-1, ATG2484-1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g23052 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g64007 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g12306 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09060 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene09572.t1 G2484-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044091 G2484-1, ATG2484-1 not classified & original description: CDS=19-6000 0.07 OrthoFinder output from all 47 species
Cba_g22302 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25741 G2484-1, ATG2484-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G054700.1 Ceric.36G054700 not classified & original description: pacid=50568782... 0.08 OrthoFinder output from all 47 species
Dac_g20555 G2484-1, ATG2484-1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12709 G2484-1, ATG2484-1 not classified & original description: none 0.16 OrthoFinder output from all 47 species
Dde_g04956 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004716001 G2484-1, ATG2484-1 No description available 0.15 OrthoFinder output from all 47 species
Gb_04223 G2484-1, ATG2484-1 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Gb_15039 G2484-1, ATG2484-1 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os10g41030.1 G2484-1,... no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Len_g14749 G2484-1, ATG2484-1 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Lfl_g03523 G2484-1, ATG2484-1 not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_20337g0010 G2484-1, ATG2484-1 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g39520 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09007 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12170 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25098 G2484-1, ATG2484-1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g39400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09835 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08133 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16311 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014511 G2484-1, ATG2484-1 not classified & original description: CDS=645-7112 0.07 OrthoFinder output from all 47 species
Sam_g18066 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Smo415212 G2484-1, ATG2484-1 No description available 0.08 OrthoFinder output from all 47 species
Solyc08g078530.4.1 G2484-1,... no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Spa_g29421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33264 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g49740 G2484-1, ATG2484-1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g08474 G2484-1, ATG2484-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002323_P004 G2484-1,... no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009630 gravitropism RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
CC GO:0000932 P-body IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010216 maintenance of DNA methylation IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010599 lsiRNA processing IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
CC GO:0016514 SWI/SNF complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
CC GO:0030870 Mre11 complex IEP HCCA
CC GO:0030981 cortical microtubule cytoskeleton IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
MF GO:0042800 histone H3K4 methyltransferase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
BP GO:0043967 histone H4 acetylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140938 histone H3 methyltransferase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 1576 1640
No external refs found!