Aliases : HSP93-III, ATHSP93-III, ATCLPC
Description : Clp ATPase
Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g21747 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g42026 | ATHSP101, HOT1, HSP101 | cytosolic chaperone *(Hsp101) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g07567 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g20352 | HSP93-V, DCA1,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ceric.02G041000.1 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.07 | OrthoFinder output from all 47 species | |
Cre12.g533351 | CLPB3, CLPB-P, APG6 | Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dde_g25408 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Gb_21720 | CLPB4, CLPB-M, HSP98.7 | organellar chaperone (Clp-p|Clp-m) | 0.06 | OrthoFinder output from all 47 species | |
Len_g29759 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Len_g34142 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Len_g37043 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g59755 | CLPB3, CLPB-P, APG6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g12284 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c19_4790V3.1 | ATHSP101, HOT1,... | heat shock protein 101 | 0.01 | OrthoFinder output from all 47 species | |
Spa_g07909 | HSP93-V, DCA1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g18708 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Spa_g38742 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g40577 | HSP93-V, DCA1,... | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Tin_g45039 | ATHSP101, HOT1, HSP101 | cytosolic chaperone *(Hsp101) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g45600 | HSP93-V, DCA1,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | ISS | Interproscan |
CC | GO:0005739 | mitochondrion | IDA | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
CC | GO:0009532 | plastid stroma | IDA | Interproscan |
CC | GO:0009536 | plastid | IDA | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
BP | GO:0009658 | chloroplast organization | ISS | Interproscan |
CC | GO:0009941 | chloroplast envelope | IDA | Interproscan |
CC | GO:0016020 | membrane | IDA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IDA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | ISS | Interproscan |
CC | GO:0031897 | Tic complex | TAS | Interproscan |
BP | GO:0034214 | protein hexamerization | IDA | Interproscan |
MF | GO:0042803 | protein homodimerization activity | IDA | Interproscan |
BP | GO:0045037 | protein import into chloroplast stroma | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0003938 | IMP dehydrogenase activity | IEP | HCCA |
CC | GO:0005829 | cytosol | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006177 | GMP biosynthetic process | IEP | HCCA |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0007059 | chromosome segregation | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009295 | nucleoid | IEP | HCCA |
CC | GO:0009330 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex | IEP | HCCA |
BP | GO:0009735 | response to cytokinin | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046037 | GMP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |