AT3G28210 (PMZ, SAP12)

Aliases : PMZ, SAP12

Description : zinc finger (AN1-like) family protein

Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28210

Target	Alias	Description	ECC score	Gene Family Method
Ala_g37949	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g36471	PMZ, SAP12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g40601	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene27980.t2	Aspi01Gene27980	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G055100.1	PMZ, SAP12,...	not classified & original description: pacid=50618072...	0.04	OrthoFinder output from all 47 species
Ceric.25G065600.1	PMZ, SAP12,...	not classified & original description: pacid=50593954...	0.03	OrthoFinder output from all 47 species
LOC_Os07g38240.1	LOC_Os07g38240	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
MA_141733g0010	No alias	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Mp4g16050.1	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Pir_g19849	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06672	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g080200.2.1	Solyc10g080200	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009753	response to jasmonic acid	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	RCA	Interproscan
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009163	nucleoside biosynthetic process	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	HCCA
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0046108	uridine metabolic process	IEP	HCCA
BP	GO:0046109	uridine biosynthetic process	IEP	HCCA
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046132	pyrimidine ribonucleoside biosynthetic process	IEP	HCCA
BP	GO:0046134	pyrimidine nucleoside biosynthetic process	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000058	Znf_AN1	16	53
IPR000058	Znf_AN1	103	142

External Links

No external refs found!

AT3G28210 (PMZ, SAP12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation